here is a somewhat informal list of aquacultured stuff:
Clownfish
False Percula Clownfish - Amphiprion ocellaris
Clark's Clownfish - Amphiprion clarkii
Tomato Clownfish - Amphiprion frenatus
Gold-Stripe Maroon Clownfish - Premnas biaculeatus
Cinnamon Clownfish - Amphiprion melanopus
Fire Clownfish - Amphiprion ephippium
Australian Clownfish - Amphiprion rubrocinctus
Orange Skunk Clownfish - Amphiprion sandaracinos
Pink Skunk Clownfish - Amphiprion periderion
Saddleback Clownfish - Amphiprion polymnus
True Percula Clownfish- Amphiprion percula
Sebae Anemonefish- Amphiprion sebae
Twoband Anemonefish- Amphiprion bicinctus
White-tipped Anemonefish- hybrid: Amphiprion sebae x Amphiprion polymnus
Dottybacks
Orchid Dottyback - Pseudochromis fridmani
Striped Dottyback - Pseudochromis sankeyi
Sunrise Dottyback - Pseudochromis flavivertix
Splendid Dottyback - Pseudochromis splendens
Neon Dottyback - Pseudochromis aldabraensis
Diadem Dottyback- Pseudochromis diadema
Lyretail Dottyback- Pseudochromis steenei
Golden Dottyback- Pseudochromis fuscus
Blue-Striped Dottyback- Pseudochromis springeri
Redhead Dottyback- Pseudochromis dilectus
Gobies
Neon Goby - Gobiosoma oceanops
Hybrid Cleaner Goby - Gobiosoma oceanops x Gobiosoma randalli
Yellowline Goby - Gobiosoma randalli
Goldline Goby - Gobiosoma louisae
Pink-Speckled Shrimpgoby- Cryptocentrus leptocephalus
Yellow Watchman Goby- Cryptocentrus cinctus
Luther’s Watchman Goby- Cryptocentrus lutheri
Red-Headed Goby- Elacatinus puncticulatus
Sharknose Goby- Gobiosoma evelynae
Blennies
Striped Poison-Fang Blenny- Meiacanthus grammistes
Green Canary Blenny- Meiacanthus tongaensis
Disco Blenny- Meiacanthus smithi
Canary Blenny- Meiacanthus oualanensis
Mozambique Fangblenny- Meiacanthus mossambicus
Bundoon Blenny- Meiacanthus bundoon
Forktail Blenny- Meiacanthus atrodorsalis
Blackline fangblenny- Meiacanthus nigrolineatus
Grammas
Royal Gramma- Gramma loreto
Blackcap Basslet- Gramma melacara
Cardinalfish
Banggai Cardinalfish- Pterapogon kauderni
Pajama Cardinalfish- Sphaeramia nematoptera
Angelfish
Half Moon Angelfish- Pomacanthus maculosus
Comets and Assessors
Yellow Assessor- Assessor flavissimus
Blue Assessor- Assessor macnelli
Marine Betta- Calloplesiops altivelis
Seahorses
Hippocampus sp.
I know that this is unclear, but one of the major seahorse breeders (Ocean Rider) does not list scientific names. To get a list, check out the major captive seahorse breeders' websites.
Jacks
Pilotfish- Gnathanodon speciosus
Snappers
Emporer snapper- Lutjanus sebae
Mobile Invertebrates
Queen Conch- Strombus gigas
Fighting Conch- Strombus alatus
Peppermint shrimp- Lysmata wurdemanni (Peppermint shrimp are not yet available, but should be soon.)
Assorted Snails