i second kris's thought processes. you really want to do it right the first time around. it would be much more of a hassle to break down the plumbing on an existing/fully setup tank as opposed to a tank you've barely gotten into.
microbubbles can actually do quite a bit of damage in a reef tank. for one, they're ugly and annoying. secondly, microbubbles can cause your light to not penetrate as deeply. now i know your tank is shallow, but the principle still stands. thirdly, and i'm not sure if i'm 100% sold on this thought, but the logic seems good enough, is that excessive bubbles/O2 in the tank can create nitrate problems. i heard this idea in a podcast, and it made sense. follow me for a moment. in aquariums, we have a bacterial balance. populations fluctuate with nutrient load, but for the most part, they are aerobic bacteria. there are anaerobic bacteria that live within deep sand beds that convert nitrate into harmless nitrogen gas. but what happens if you have a large supply of oxygen from bubbles is you are supplying one of the limiting factors that keeps bacterial populations down. these bacteria will convert ammonia to nitrite, and nitrite to nitrate. so, to sum it up, allowing more bubbles/O2 to enter your water column may increase the amount of nitrifying bacteria thereby increasing the amount of nitrate in your tank.
i know there are flaws in this argument, but when i heard it, it kind of made sense. and the person who brought it up was explaining to someone else why we don't use airstones in our tanks like people use in freshwater tanks. again, i know the flaws of this argument and i'm not promoting it necessarily...just saying some possibilities.